Syntenic sub-genome:
Homeolog:
Homeolog:
Gene Expression:
DNA sequence:
Copy to clipboard
Expand
BLAST sequence
CGCCATTCCGTCTCTCTTCACGCGC...
CGCCATTCCGTCTCTCTTCACGCGCCACTCTCTCTCTCTCTCTCTTTCAAATAACCCAAAAATTCCCCTTCTCTTCCCTACTTCTCCCCAGATTTGAGATTTCAGTGCTCTCTCTCTCAGTGCTTGCTCTCTCTCACATAATTGTTCTAGGTCGTCCCAACCCAGATTTACAGATTCATTCACCAACAAAAAAAAAAAAAAAGAAATGGACTCTCTTCCTGATGCGCTCCTTCAATACATTCTTTCCAACATGACCGCTGCAAAAGATGTGGCTGCTTGCAACTGCGTCTCCAACCGATGGAAAGAGTCTACAGACTCTGTTCAGAAAATTACATTCCTCCGGAATTCTTTCGATAGCATCATCTCCAAGACTGATGATGATGATGATGATGATTCTGACACCATCTCCAAGACTGATGAATCTGACACCATCGTTCGCAAGATGATTTCCTCTTTCCGTCGTCTTGAGGAGCTTGTGGTCTACAGCCCATTCTCTAGCAATGGTCTAGCTTCTTGGATGGCCCATGTGGGTTCGTCTCTTAAGCTATTGGAGCTGAGAATGGATAATCTCGCTAGCGAAGACGCTATTGTAGAGGGTCCTTTGAAGCTTGACTGCGTTGGTGTGGCTAAGAATCTGGAGACTTTAAGGCTTTGGGGTGTTTTGATGATGAGCCCTCCCAAGTGGGATATGTTCCCAAACCTTCGCTGCCTCGAAATAGTTGGAGCAAGAACTGATGATGCCACTCTGTGTCATGCTCTCCGTGCTTGCCCGAATCTGAGTAACTTGCTTCTGCTAGCTTGTGAGGGAGTTAAGTCCATATCGATCGATCTGCCATACTTGGAGCATTGTAAGCTGGATTTCTATGGACCAGGTAACAGCGTGCTAGTCCTCACTAGTCCGAGGTTACTGTCCCTTGATGTTCAAGGCTGTAGCTTTATCCGTGTCCCTGAAACCAGATTCTTAAAGACCCTATCCATCTCCAATATTGCTGGGAGAGTTTACATGGTAGATTTTCATAACCTTTCGTCGCTTGAGGACTTGTCGATTCGGGGTATACAATGGTGTTGGGATGCGTTATGCATAATGCTGCAGCAAGCAAGAGACGTGAAGCATCTCTTTATGAAGGTTGAATTCACAGGCAATGAGTCCCTTCAACCATTTCCTGAGATTGATTTTGTCGAGTTCTTCAATAACCATCCCAAGCTTCAAACATTCGACATCCATGGAGCAATGTTCGCTGCGCTTTGCCAAAAGAACAGCCTAAAAAAGCTTGAGACAGGATTTGCAATACCGTGTTTGGAGAAGGTTACTATCACAGTAAGATCTCCACTGAACGCAGAACAGAAGATGAACACGCTCGAGTCGCTTGTGAGATATGCGAGAGTTTTGAAACGAATGGTGATAAGGATTCTTCGGATGAAGAGCAATCACAGCGGTGCAGATGATTTCTGCGATGACGTCTGCAAGTTCCGGTACATGCATCAGCATCTTGTTCAAATTGAATGAAATAATTGCTAATCTAAAATTTTCGGCCATTGATTTCTGTTTCTCATTTGTATTCGCTGAGCATTTCTAGTTTGAACTCTTGAGTAAATTTTTTGTTTCCTGATCCATGGTTTTGAACTTTTGAATCTAATGCCATTTTAGAACTTTTTCCTGCTGTTGTCTTTAAAAGGAATGATTATGAAC
CDS sequence:
Copy to clipboard
Expand
BLAST sequence
ATGGACTCTCTTCCTGATGCGCTCC...
ATGGACTCTCTTCCTGATGCGCTCCTTCAATACATTCTTTCCAACATGACCGCTGCAAAAGATGTGGCTGCTTGCAACTGCGTCTCCAACCGATGGAAAGAGTCTACAGACTCTGTTCAGAAAATTACATTCCTCCGGAATTCTTTCGATAGCATCATCTCCAAGACTGATGATGATGATGATGATGATTCTGACACCATCTCCAAGACTGATGAATCTGACACCATCGTTCGCAAGATGATTTCCTCTTTCCGTCGTCTTGAGGAGCTTGTGGTCTACAGCCCATTCTCTAGCAATGGTCTAGCTTCTTGGATGGCCCATGTGGGTTCGTCTCTTAAGCTATTGGAGCTGAGAATGGATAATCTCGCTAGCGAAGACGCTATTGTAGAGGGTCCTTTGAAGCTTGACTGCGTTGGTGTGGCTAAGAATCTGGAGACTTTAAGGCTTTGGGGTGTTTTGATGATGAGCCCTCCCAAGTGGGATATGTTCCCAAACCTTCGCTGCCTCGAAATAGTTGGAGCAAGAACTGATGATGCCACTCTGTGTCATGCTCTCCGTGCTTGCCCGAATCTGAGTAACTTGCTTCTGCTAGCTTGTGAGGGAGTTAAGTCCATATCGATCGATCTGCCATACTTGGAGCATTGTAAGCTGGATTTCTATGGACCAGGTAACAGCGTGCTAGTCCTCACTAGTCCGAGGTTACTGTCCCTTGATGTTCAAGGCTGTAGCTTTATCCGTGTCCCTGAAACCAGATTCTTAAAGACCCTATCCATCTCCAATATTGCTGGGAGAGTTTACATGGTAGATTTTCATAACCTTTCGTCGCTTGAGGACTTGTCGATTCGGGGTATACAATGGTGTTGGGATGCGTTATGCATAATGCTGCAGCAAGCAAGAGACGTGAAGCATCTCTTTATGAAGGTTGAATTCACAGGCAATGAGTCCCTTCAACCATTTCCTGAGATTGATTTTGTCGAGTTCTTCAATAACCATCCCAAGCTTCAAACATTCGACATCCATGGAGCAATGTTCGCTGCGCTTTGCCAAAAGAACAGCCTAAAAAAGCTTGAGACAGGATTTGCAATACCGTGTTTGGAGAAGGTTACTATCACAGTAAGATCTCCACTGAACGCAGAACAGAAGATGAACACGCTCGAGTCGCTTGTGAGATATGCGAGAGTTTTGAAACGAATGGTGATAAGGATTCTTCGGATGAAGAGCAATCACAGCGGTGCAGATGATTTCTGCGATGACGTCTGCAAGTTCCGGTACATGCATCAGCATCTTGTTCAAATTGAATGA
Protein sequence:
Copy to clipboard
Expand
BLAST sequence
MDSLPDALLQYILSNMTAAKDVAAC...
MDSLPDALLQYILSNMTAAKDVAACNCVSNRWKESTDSVQKITFLRNSFDSIISKTDDDDDDDSDTISKTDESDTIVRKMISSFRRLEELVVYSPFSSNGLASWMAHVGSSLKLLELRMDNLASEDAIVEGPLKLDCVGVAKNLETLRLWGVLMMSPPKWDMFPNLRCLEIVGARTDDATLCHALRACPNLSNLLLLACEGVKSISIDLPYLEHCKLDFYGPGNSVLVLTSPRLLSLDVQGCSFIRVPETRFLKTLSISNIAGRVYMVDFHNLSSLEDLSIRGIQWCWDALCIMLQQARDVKHLFMKVEFTGNESLQPFPEIDFVEFFNNHPKLQTFDIHGAMFAALCQKNSLKKLETGFAIPCLEKVTITVRSPLNAEQKMNTLESLVRYARVLKRMVIRILRMKSNHSGADDFCDDVCKFRYMHQHLVQIE
Coexpression: Pearson Correlation Coefficient (PCC)
Camelina co-expression network TF-centered. For each TF, we are presenting the top 10 genes with the heighest PCC
Download CSV